Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015814574.1_cds_XP_016497987.1_12064
CDS Infomation

[gene=LOC107816762] [db_xref=GeneID:107816762] [protein=transcription factor E2FA-like] [protein_id=XP_016497987.1] [location=join(7885..8142,8764..8956,9128..9178,9288..9373,9446..9534,9624..9678,9883..9935,10017..10067,10161..10209,10334..10399,10478..10554,10679..10910,11400..11466,11544..11671)] [gbkey=CDS]
Sequence

ATGTCTTTTGATACAAAAATGACAGGTTCAGATGCACCGCCCACTGGTGTGGCGGCGCCA
CCGGCTGCTCAGTCATCATCCGCCGCCGTGAACGGCGGAGGGAGGAGTCAGATCTCCCAG
CCGATCAGACGATACCTGCCCTTTGCTTCAATGAGGCCGCCATTTGTTAGTCCTGAGGAT
TACCACCGATTTGGTGGTGTTGATTCTCGGATTGGGTCCCCTACTTTACAGCCTGATGCT
ATTGTTGTTAAGTCCCCTGCACTAAAGCGGAAGGGTGGGATGGGCTATAAAGCAGTTGAG
TCCTGTGACTGGACTGCTAATCCTGGGTATTCGGATGTGGCCAATAGTCCACTTGGAACG
CCAGTGTCTGGAAAAGGAGGAAGAGCAAATGGACGGTCAAGAGCCACAAAAAGCAATAAA
TCTGGACCTCCAACTCCTGTCTCTAATGTTGGTTCTCCTTCTCCTCTTACACCTGCAAGT
TGCCGTTACGACAGTTCATTGGGTCTTCTAACCAAGAAATTTATCAACTTGATCAAGCAT
GCTGAAGATGGTATGCTTGATCTTAACCAGGCTGCAGATACTTTGGAGGTGCAGAAAAGA
AGGATATATGATATAACAAATGTGCTTGAAGGAATTGGTCTTATTGAAAAGAAGCTCAAG
AACAGAATACAATGGAAGGGTGTTGATGCTTCTAGACCTGGAGAAGTGGATAATGATGCT
GCCATTTTAAAGGCAGAAACTGAAAGCCTTTCGATAGAAGAGCGAAGATTGGATGACCGA
GTTAGAGAATTGCAAGAAAAGTTAAGGGATATGAGTGAAGATGAAGACAACCAAAAATGG
CTTTTTGTAACTGAAGAAGATATAAAGAGCCTACCTTGCTTTCAGAATGAGACCCTCATA
GCAGTTAAAGCTCCTCATGGCACCACCCTGGAAGTCCCAGATCCTGACGAGGCTGTGGAC
TATCCACAAAGGAGATATAGAATTATACTCAGAAGCACAATGGGTCCAATTGATGTCTAC
CTCGTCAGTCAATTCGAGGAGAAGTTTGAGGAGATGAATAGTGTTGAACCATCAATGGCC
ATCCCAGTTGCTTCAAGTTCAGGCTCAAAGGACAATCCGGCCATGGAGAGATCAACTCTT
TCAAACAATGTTACTGAGAATGAAGGACAAACACAAAATGTTGATCAATTGAGTTCTGAT
CTTGGTACTTCACAGGATTACGGTGGTGGAATGATGAAGGTTGTCCCTTCAGATGTTGAT
AATGATGCAGATTACTGGCTCCTATCAGATGCACATGTTAGCATCACAAATATGTGGGAG
GCAGATCCTGCAGTTGAATGGGATGGGGAAAACTTGCTCCATGAATTTGGAATAGCTGAT
CTAGGTACCCCAAGGGCACATACTCCATCTGCTGTTACTGATGTACCAACCCCAATGAAC
GTGCCACCAAGATGA

Peptide Sequence

PEP ID

XP_016497987.1
PEP Infomation

PREDICTED: transcription factor E2FA-like [Nicotiana tabacum]
Sequence

MSFDTKMTGSDAPPTGVAAPPAAQSSSAAVNGGGRSQISQPIRRYLPFASMRPPFVSPED
YHRFGGVDSRIGSPTLQPDAIVVKSPALKRKGGMGYKAVESCDWTANPGYSDVANSPLGT
PVSGKGGRANGRSRATKSNKSGPPTPVSNVGSPSPLTPASCRYDSSLGLLTKKFINLIKH
AEDGMLDLNQAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGVDASRPGEVDNDA
AILKAETESLSIEERRLDDRVRELQEKLRDMSEDEDNQKWLFVTEEDIKSLPCFQNETLI
AVKAPHGTTLEVPDPDEAVDYPQRRYRIILRSTMGPIDVYLVSQFEEKFEEMNSVEPSMA
IPVASSSGSKDNPAMERSTLSNNVTENEGQTQNVDQLSSDLGTSQDYGGGMMKVVPSDVD
NDADYWLLSDAHVSITNMWEADPAVEWDGENLLHEFGIADLGTPRAHTPSAVTDVPTPMN
VPPR

Transcript Sequence

Gene sequence data has not been registered.